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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921169.1_cds_XP_016470187.1_62664
CDS Infomation

[gene=LOC107792484] [db_xref=GeneID:107792484] [protein=testis-expressed sequence 10 protein-like] [protein_id=XP_016470187.1] [location=join(40603..40662,40741..40813,41102..41224,41984..42153,43307..43456,45233..45382,46411..46468,50591..50910,54784..54915,57291..57437,57748..57834,58110..58232,58345..58462,58568..58693,68460..68635)] [gbkey=CDS]
Sequence

ATGGTCAACAAGTCTAAAGCTCAATCCAAGAAGAAGCAAAAGCGTGGTGTTGATTTCAAA
AAAATAAAAAGGAAAATTGGAAGAAAATTGCCTCCGGCCCAGAATGCTACCAACACTGAA
ATCAAATCCAAAGCAATTATTCTACCTGAGCAAAGTGTAGCTTCAGAGAAGGCTGGTTTA
GCTGTGAGCAAGAAAGGTTTAACGTTGAAAGAGCTTCTTCAGCAAACAAGTCATCACAAT
GCCAAAGTTCGTAAAGATGCTTTAATCGGAATTAGAGATGTTCTTCTTAAATTCCCTGCT
GAATTGAAACTGCATAAGCTAGCTGTTATTGAGAAATTACGTGAACGTATCAGTGACGAT
GATAAGTTGGTCCGTGAAACACTCTATCAGCTTCTCAAGTCAGTTATTTTTCCTGGCTGT
AAAGAGGATAATAAGGGACCAATTAATTCCTTGATGATGACATATATATTTAATGCGATG
ACAAACATGGCTATTGAAGTGCGGTTGATGGCTTTCAAATTTTTTGACCTCTTGATCCAG
TATTTTCCGTCTTCCTTTTTATTGTACGCTGAAAAGATTCTCCAGAACTATGAGGACATT
CTGCAGAAGAACAGATTTTACTTGCAAGACAAGGGCAGGCTAAAGAATGCTCTTGCTGGG
TTGGTTCGCTGCTTGTCACTGTTACCGTGTAGTAATCAGAAAGAAGGCGACTCCTTAAGT
GACAATGATGCAGCTCGGGCTAGCTTGCATGCTTTTGACCTTGATGTCTCCAATAAATCT
ACTGGTCTTTCTGGTGTTGTCAACAAGTTGACAGATCTCTTACCCATTCTAGTTAGCTGC
TTCCAGGACTTTAGTCCACTGATCCACTCCACAGCCCAGATAGATGCACAATCCTTCGAT
TGTATGTTGTCTTTACTTCAAAGCATTGATCTTGTGGTGAGGTTCTTTGTTCATGCGTCT
GGCAAATGTCAACAAGACTCCCAAAATCTGCCACCTCACCAGAAAAACAACCTTAGCATA
TGTGACCAAAGTATATCAGTAGTGAATTTAAAGAAGTTATGGGATGAGTTCCCCTTGAGT
CCAGTTCATTGCTTGTCAGAGAAGGACGGTGACCGATATTTCACACTGAATATTGCGATT
ACAGAAATATTTTTGCAACTAAGTTATGGGTCCAAATTATCTCCTGCATTGTTGGAAAGA
TTTCTGGAGTTCATCGAGAGTTCTCTATCTGAAAAGATTTGCAATGGCAGAGAGGCCGGT
AAAGTTCATCATGAGAAGCATTTAGTTCCACTGGTTGCTTTTACCCCAAAACTTATTATG
CAAGTGTCTGGTACTTGGAAGTCTTTGATCAATGATGGTGCTTGGAAGTCTCGTATCCTT
CAGGCTTTCATGACAGTTTTGCAGAAATGCAGTCCAGAGTCCTCAATGAAATTGGCTTGC
CTTTCTGCTGTTGAGGAAATGCTACTTCCTGAGCAGGATTGGCTTTATCTGGATTCTAAG
GATCTTGAAATATTTAATCATCAAATTGCATGGATAAGGGAGCTTCCAAAGCTGTTAGTC
CTCTTAGGTGATAAACACCCATTACATGCAAAGGCTGTGTTGCGTCTTCAACTTCGTCTT
GGACAAGCTGCTAGTTTGAATGGTCCACTGGCAAAAGAATATGACAATATGCAGCACATA
ATACGAGATTTTTACTGCACCTGCCTCGATGGAACTGTAAGCTATGGTCCGTTCATGAGG
CTTCCTAGAGATATTCAGGAGCTCTCAATATGCTGCCTATATTACTTTTCTTTCTTGGAC
ACTGTGCTACTTCAACCTTTAGTCTCATGTTGCATATGCCACGAGTTGGAACCATTTATC
CTTTTCCGAATAATAGAAGTTCTGCAGTCATCCTACAAAGCTGGCCATATCCAGATTGCA
GATTATATTAGCTTCTTCATCACTTTGCTTTNTGCTCCTTACTATGGATGGAAGCACAAA
GTTCTTAAAGGAATCAAGTTTTTCCGGAAATGA

Peptide Sequence

PEP ID

XP_016470187.1
PEP Infomation

PREDICTED: testis-expressed sequence 10 protein-like [Nicotiana tabacum]
Sequence

MVNKSKAQSKKKQKRGVDFKKIKRKIGRKLPPAQNATNTEIKSKAIILPEQSVASEKAGL
AVSKKGLTLKELLQQTSHHNAKVRKDALIGIRDVLLKFPAELKLHKLAVIEKLRERISDD
DKLVRETLYQLLKSVIFPGCKEDNKGPINSLMMTYIFNAMTNMAIEVRLMAFKFFDLLIQ
YFPSSFLLYAEKILQNYEDILQKNRFYLQDKGRLKNALAGLVRCLSLLPCSNQKEGDSLS
DNDAARASLHAFDLDVSNKSTGLSGVVNKLTDLLPILVSCFQDFSPLIHSTAQIDAQSFD
CMLSLLQSIDLVVRFFVHASGKCQQDSQNLPPHQKNNLSICDQSISVVNLKKLWDEFPLS
PVHCLSEKDGDRYFTLNIAITEIFLQLSYGSKLSPALLERFLEFIESSLSEKICNGREAG
KVHHEKHLVPLVAFTPKLIMQVSGTWKSLINDGAWKSRILQAFMTVLQKCSPESSMKLAC
LSAVEEMLLPEQDWLYLDSKDLEIFNHQIAWIRELPKLLVLLGDKHPLHAKAVLRLQLRL
GQAASLNGPLAKEYDNMQHIIRDFYCTCLDGTVSYGPFMRLPRDIQELSICCLYYFSFLD
TVLLQPLVSCCICHELEPFILFRIIEVLQSSYKAGHIQIADYISFFITLLXAPYYGWKHK
VLKGIKFFRK

Transcript Sequence

Gene sequence data has not been registered.